This paper is only available as a PDF. To read, Please Download here.
Amplification methods for detection of Mycobacterium tuberculosis, such as polymerase
chain reaction (PCR), have undergone much research and development in the last several
years. The most common methods for extraction, amplification, and detection of mycobacterial
nucleic acid sequences used in “in-house” PCR assays are discussed. A list of commercially
prepared PCR and non-PCR amplification assays that should be available soon is included.
The pros and cons of “in-house” versus commercial technology and issues of implementation
of molecular technology in the clinical laboratory are reviewed.
To read this article in full you will need to make a payment
Purchase one-time access:
Academic & Personal: 24 hour online accessCorporate R&D Professionals: 24 hour online accessOne-time access price info
- For academic or personal research use, select 'Academic and Personal'
- For corporate R&D use, select 'Corporate R&D Professionals'
Subscribers receive full online access to your subscription and archive of back issues up to and including 2002.
Content published before 2002 is available via pay-per-view purchase only.
Subscribe:
Subscribe to Clinics in Laboratory MedicineAlready a print subscriber? Claim online access
Already an online subscriber? Sign in
Register: Create an account
Institutional Access: Sign in to ScienceDirect
References
- Detection of Mycobacterium tuberculosis in clinical specimens by polymerase chain reaction and Gen-Probe amplified Mycobacterium tuberculosis direct test.J Clin Microbiol. 1993; 31: 3270-3274
- Simple sensitive and specific detection of human immunodeficiency virus type I in clinical specimens by polymerase chain reaction with nested primers.J Clin Microbiol. 1990; 28: 1560-1564
- Detection and identification of mycobacteria by amplification of rRNA.J Clin Microbiol. 1990; 28: 1751-1759
- Rapid diagnosis of tuberculosis by amplification of mycobacterial DNA in clinical samples.Lancet. 1989; 2: 1069-1071
- Rapid, simple method for treating clinical specimens containing Mycobacterium tuberculosis to remove DNA for polymerase chain reaction.J Clin Microbiol. 1992; 30: 1331-1334
- Large scale use of polymerase chain reaction for detection of Mycobacterium tuberculosis in a routine mycobacteriology laboratory.J Clin Microbiol. 1993; 31: 2041-2056
- Amplification of a species specific DNA fragment of Mycobacterium tuberculosis and its possible use in diagnosis.J Clin Microbiol. 1991; 29: 2163-2168
- Direct detection of Mycobacterium tuberculosis in clinical specimens by DNA amplification.J Clin Microbiol. 1990; 28: 2437-2441
- Repetitive DNA sequences as probes for Mycobacterium tuberculosis.J Clin Microbiol. 1988; 26: 2240-2245
- Polymerase chain reaction amplification of a repetitive DNA sequence specific for Mycobacterium tuberculosis.J Infect Dis. 1990; 161: 977-981
- PCR detection of Mycobacterium tuberculosis.in: Persing DH Smith TF Tenover F Diagnostic Molecular Microbiology. Principles and Applications. American Society of Microbiology, Washington, DC1992
- DNA amplification and reverse dot blot hybridization for detection and identification of mycobacteria to the species level in the clinical laboratory.J Clin Microbiol. 1992; 30: 1220-1224
- Detection of Mycobacterium tuberculosis DNA in clinical samples by using a simple lysis method and polymerase chain reaction.J Clin Microbiol. 1993; 31: 1019-1021
- Establishing a molecular diagnostics laboratory.Adv Pathol Lab Med. 1992; 5: 35-50
- Sample preparation methods.in: Persing DH Smith TF Tenover F Diagnostic Molecular Microbiology. Principles and Applications. American Society of Microbiology, Washington, DC1993
- Detection and identification of mycobacteria by amplification of mycobacterial DNA.Mol Microbiol. 1989; 3: 843-849
- The role of PCR in the diagnosis of mycobacterial infections.Rev Med Microbiol. 1994; 5: 21-32
- Specific detection of Mycobacterium tuberculosis complex strains by polymerase chain reaction.J Clin Microbiol. 1990; 28: 1204-1213
- Detection and identification of Mycobacterium tuberculosis directly from sputum sediments by amplification of rRNA.J Clin Microbiol. 1993; 31: 2410-2416
- Genotypic identification of mycobacteria by nucleic acid sequence determination: Report of a two year experience in a clinical laboratory.J Clin Microbiol. 1993; 31: 2882-2889
- Detection of Mycobacterium tuberculosis in sputum samples by polymerase chain reaction using a simplified procedure.J Clin Microbiol. 1993; 31: 1435-1438
- Evaluation of Gen-Probe amplified Mycobacterium tuberculosis direct test and PCR for direct detection of Mycobacterium tuberculosis in clinical specimens.J Clin Microbiol. 1994; 32: 393-397
- Nested polymerase chain reaction for detection of Mycobacterium tuberculosis in clinical samples.J Clin Microbiol. 1993; 31: 2228-2232
- Questionable reliability of the polymerase chain reaction in the detection of Mycobacterium tuberculosis.N Engl J Med. 1993; 329: 2036
- Sensitivity and specificity of PCR for detection of Mycobacterium tuberculosis: A blind comparison study among seven laboratories.J Clin Microbiol. 1994; 32: 277-284
- Sequence analysis and amplification by polymerase chain reaction of a cloned DNA fragment for identification of Mycobacterium tuberculosis.J Clin Microbiol. 1990; 28: 513-518
- Direct detection of Mycobacterium tuberculosis complex in respiratory specimens by a target amplified test system.J Clin Microbiol. 1994; 32: 918-923
- Use of a reamplification protocol improves sensitivity of detection of Mycobacterium tuberculosis in clinical samples by amplification of DNA.J Clin Microbiol. 1991; 29: 712-717
- Nested polymerase chain reaction assay for the detection of cytomegalovirus overcomes false positives caused by contamination with fragmented DNA.J Med Virol. 1990; 30: 85-91
- Comparison of sensitivity for human cytomegalovirus of the polymerase chain reaction, traditional tube culture and shell vial assay by sequential dilutions of infected cell lines.J Virol Methods. 1991; 32: 181-191
- Rapid diagnosis of tuberculous meningitis by polymerase chain reaction.Lancet. 1991; 337: 5-7
- Genus specific polymerase chain reaction for the mycobacterial DNA J gene and species specific oligonucleotide probes.J Clin Microbiol. 1993; 31: 446-450
- Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis.J Clin Microbiol. 1993; 31: 175-178
- Characterization of a Mycobacterium tuberculosis insertion sequence, IS6110, and its application in diagnosis.J Clin Microbiol. 1990; 28: 2668-2673
- Identification of Mycobacterium sp. by using amplified ribosomal DNA restriction analysis.J Clin Microbiol. 1993; 31: 2061-2065
- Purification of sputum samples through sucrose improves detection of Mycobacterium tuberculosis by polymerase chain reaction.J Clin Microbiol. 1992; 30: 1514-1517
- Comparison of various repetitive DNA element as genetic markers for strain differentiation and epidemiology of Mycobacterium tuberculosis.J Clin Microbiol. 1993; 31: 1987-1995
- Optimization of an in-house one-tube nested PCR assay for detection of Mycobacterium tuberculosis.Clin Infect Dis. 1994; 19: 566
- Progress towards a simplified polymerase chain reaction and its application to diagnosis of tuberculosis.J Clin Microbiol. 1993; 31: 776-782
- Advances in nucleic acid-based detection methods.Clin Microbiol Rev. 1992; 5: 370-386
Article info
Identification
Copyright
© 1996 Elsevier Inc. Published by Elsevier Inc. All rights reserved.