Keywords
Purchase one-time access:
Academic & Personal: 24 hour online accessCorporate R&D Professionals: 24 hour online accessOne-time access price info
- For academic or personal research use, select 'Academic and Personal'
- For corporate R&D use, select 'Corporate R&D Professionals'
Subscribers receive full online access to your subscription and archive of back issues up to and including 2002.
Content published before 2002 is available via pay-per-view purchase only.
Subscribe:
Subscribe to Clinics in Laboratory MedicineReferences
- Biomedical mass spectrometry in today’s and tomorrow’s clinical microbiology laboratories.J Clin Microbiol. 2012; 1: 1513-1517
- MALDI TOF MS profiling of bacteria at the strain level: a review.Mass Spectrom Rev. 2013; 32: 188-217
- Robustness of two MALDI-TOF mass spectrometry systems for bacterial identification.J Microbiol Methods. 2012; 89: 133-136
- Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identification of clinically relevant bacteria.PLoS One. 2011; 6: e16424
- Species identification of clinical isolates of anaerobic bacteria: a comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry systems.J Clin Microbiol. 2011; 1: 4314-4318
- Evaluation of the Bruker Biotyper and Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry systems for identification of nonfermenting gram-negative bacilli isolated from cultures from cystic fibrosis patients.J Clin Microbiol. 2012; 1: 2034-2039
- Performance of matrix-assisted laser desorption-time of flight mass spectrometry for identification of clinical yeast isolates.Mycoses. 2013; 56: 229-235
- MALDI-TOF MS Andromas strategy for the routine identification of bacteria, mycobacteria, yeasts, Aspergillus spp. and positive blood cultures.Clin Microbiol Infect. 2012; 18: 1117-1125
- MALDI mass spectrometry analysis of high molecular weight proteins from whole bacterial cells: pretreatment of samples with surfactants.J Am Soc Mass Spectrom. 2005; 16: 1422-1426
- Experimental factors affecting the quality and reproducibility of MALDI TOF mass spectra obtained from whole bacteria cells.J Am Soc Mass Spectrom. 2003; 14: 342-351
- Comparison of the MALDI Biotyper system using Sepsityper specimen processing to routine microbiological methods for identification of bacteria from positive blood culture bottles.J Clin Microbiol. 2012; 1: 346-352
- The benefit of appropriate empirical antibiotic treatment in patients with bloodstream infection.J Intern Med. 1998; 244: 379-386
- Inadequate antimicrobial treatment: an important determinant of outcome for hospitalized patients.Clin Infect Dis. 2000; 31: S131-S138
- Surviving Sepsis Campaign.Crit Care Med. 2013; 41: 580-637
- The clinical significance of positive blood cultures: a comprehensive analysis of 500 episodes of bacteremia and fungemia in adults. I. Laboratory and epidemiologic observations.Clin Infect Dis. 1983; 1: 35-53
- Rapid identification of bacteria in positive blood culture broths by matrix-assisted laser desorption ionization-time of flight mass spectrometry.J Clin Microbiol. 2010; 1: 444-447
- Matrix-assisted laser desorption ionization-time of flight mass spectrometry for direct bacterial identification from positive blood culture pellets.J Clin Microbiol. 2010; 48: 1481-1483
- Direct identification of bacteria in positive blood culture bottles by matrix-assisted laser desorption ionisation time-of-flight mass spectrometry.PLoS One. 2009; 4: e8041
- Real-time identification of bacteria and Candida species in positive blood culture broths by matrix-assisted laser desorption ionization-time of flight mass spectrometry.J Clin Microbiol. 2010; 48: 1542-1548
- Rapid species diagnosis for invasive candidiasis using mass spectrometry.PLoS One. 2010; 5: e8862
- Direct identification of bacteria from BacT/ALERT anaerobic positive blood cultures by MALDI-TOF MS: MALDI Sepsityper kit versus an in-house saponin method for bacterial extraction.J Med Microbiol. 2012; 61: 1511-1516
- Rapid identification of bacteria and yeasts from positive BacT/ALERT blood culture bottles by using a lysis-filtration method and MALDI-TOF mass spectrum analysis with SARAMIS database.J Clin Microbiol. 2013; 51: 805-809
- Applications of MALDI-TOF mass spectrometry in clinical diagnostic microbiology.FEMS Microbiol Rev. 2012; 36: 380-407
- An evaluation of three processing methods and the effect of reduced culture times for faster direct identification of pathogens from BacT/ALERT blood cultures by MALDI-TOF MS.Eur J Clin Microbiol Infect Dis. 2012; 31: 1575-1583
- Identification and susceptibility testing of microorganism by direct inoculation from positive blood culture bottles by combining MALDI-TOF and Vitek-2 Compact is rapid and effective.J Infect. 2012; 65: 513-520
- The sensitivity of direct identification from positive BacT/ALERTTM (bioMérieux) blood culture bottles by matrix-assisted laser desorption ionization time-of-flight mass spectrometry is low.Clin Microbiol Infect. 2011; 1: 192-195
- Rapid identification of bacteria from positive blood culture bottles by use of matrix-assisted laser desorption-ionization time of flight mass spectrometry fingerprinting.J Clin Microbiol. 2010; 48: 1584-1591
- MALDI-TOF mass signatures for differentiation of yeast species, strain grouping and monitoring of morphogenesis markers.Anal Bioanal Chem. 2008; 392: 439-449
- Times to detection of bacteria and yeasts in BACTEC 9240 blood culture bottles.J Clin Microbiol. 1999; 37: 2024-2026
- Identification of blood culture isolates directly from positive blood cultures by use of matrix-assisted laser desorption ionization-time of flight mass spectrometry and a commercial extraction system: analysis of performance, cost, and turnaround time.J Clin Microbiol. 2012; 50: 3324-3328
- Direct MALDI-TOF mass spectrometry assay of blood culture broths for rapid identification of Candida species causing bloodstream infections: an observational study in two large microbiology laboratories.J Clin Microbiol. 2012; 50: 176-179
- Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.J Appl Microbiol. 2010; 108: 375-385
- Impact of laboratory-reported urine culture colony counts on the diagnosis and treatment of urinary tract infection for hospitalized patients.Am J Clin Pathol. 2012; 137: 778-784
- Direct identification of urinary tract pathogens from urine samples by matrix-assisted laser desorption ionization-time of flight mass spectrometry.J Clin Microbiol. 2010; 48: 2110-2115
- Direct identification of bacteria in urine samples by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and relevance of defensins as interfering factors.J Med Microbiol. 2012; 61: 339-344
- Direct identification of microbes in urine specimens using mass spectrometry.Clin Chem. 2012; 58: A137
- MALDIquant: a versatile R package for the analysis of mass spectrometry data.Bioinformatics. 2012; 1: 2270-2271
- A language for data analysis and graphics.J Comput Graph Stat. 1996; 5: 299-314
- Fishing for biomarkers: analyzing mass spectrometry data with the new ClinProTools software.Biotechniques. 2005; : 37-40
- Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching.Bioinformatics. 2006; 1: 2059-2065
- An integrated workflow for robust alignment and simplified quantitative analysis of NMR spectrometry data.BMC Bioinformatics. 2011; 20: 405
- LIBSVM: a library for support vector machines.ACM Trans Intell Syst Technol. 2011; 2: 1-27
- Biomarker profiling and reproducibility study of MALDI-MS measurements of Escherichia coli by analysis of variance-principal component analysis.Anal Chem. 2008; 1: 1474-1481
- Identification of Francisella tularensis by whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry: fast, reliable, robust, and cost-effective differentiation on species and subspecies levels.J Clin Microbiol. 2010; 1: 1061-1069
- Discrimination between S. pneumoniae and S. mitis based on sorting of their MALDI mass spectra.Clin Microbiol Infect. 2012; ([Epub ahead of print])https://doi.org/10.1111/1469-0691.12113
- Machine learning methods for predictive proteomics.Brief Bioinform. 2008; 1: 119-128
- Signal detectability the use of ROC curves and their analyses.Med Decis Making. 1991; 1: 102-106
Provost F. The case against accuracy estimation for comparing induction algorithms. Proceeding ICML ‘98 Proceedings of the Fifteenth International Conference on Machine Learning. San Francisco (CA): Morgan Kaufmann Publishers Inc; 1998. p. 445-53.
- PyBact: an algorithm for bacterial identification.EXCLI J. 2011; 10: 240-245
- The WEKA data mining software: an update.SIGKDD Explor Newsl. 2009; 11 (Available at:): 10-18
- Use of proteomic patterns in serum to identify ovarian cancer.Lancet. 2002; 16: 572-577
- Proteomics and cancer: running before we can walk?.Nature. 2004; 3: 496-497
- Molecular Koch’s postulates applied to microbial pathogenicity.Rev Infect Dis. 1988; 1: S274-S276
- Detection of staphylococcus aureus delta-toxin production by whole-cell MALDI-TOF mass spectrometry.PLoS One. 2012; 6: 7
- Bacterial species identification from MALDI-TOF mass spectra through data analysis and machine learning.Syst Appl Microbiol. 2011; 34: 20-29
- Recognition of Clostridium difficile PCR-ribotypes 001, 027 and 126/078 using an extended MALDI-TOF MS system.Eur J Clin Microbiol Infect Dis. 2011; 1: 1431-1436
- Identification of clinical isolates of α-haemolytic streptococci by 16S rRNA gene sequencing, MALDI TOF MS by MALDI Biotyper and conventional phenotypic methods—a comparison.J Clin Microbiol. 2012; 50: 4087-4090
- Differentiation of Streptococcus pneumoniae from nonpneumococcal streptococci of the Streptococcus mitis group by matrix-assisted laser desorption ionization–time of flight mass spectrometry.J Clin Microbiol. 2012; 1: 2863-2867
- The use of MALDI-TOF MS to identify vancomycin resistant enterococci and investigate the epidemiology of an outbreak.J Clin Microbiol. 2012; 50: 2918-2931
- Rapid discrimination between methicillin-sensitive and methicillin-resistant Staphylococcus aureus by intact cell mass spectrometry.J Med Microbiol. 2000; 1: 295-300
- Optimisation of intact cell MALDI method for fingerprinting of methicillin-resistant Staphylococcus aureus.J Microbiol Methods. 2005; 62: 273-284
- Identification of staphylococcus aureus and determination of its methicillin resistance by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.Anal Chem. 2002; 1: 5487-5491
- MALDI-TOF MS fingerprinting allows for discrimination of major methicillin-resistant Staphylococcus aureus lineages.Int J Med Microbiol. 2011; 301: 64-68
- Phylogenetic classification and identification of bacteria by mass spectrometry.Nat Protoc. 2009; 4: 732-742
- Sample preparation of Gram-positive bacteria for identification by matrix assisted laser desorption/ionization time-of-flight.J Microbiol Methods. 2002; 48: 107-115
- Matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry for detection of antibiotic resistance mechanisms: from research to routine diagnosis.Clin Microbiol Rev. 2013; 1: 103-114
- Differentiation of cfiA-negative and cfiA-positive Bacteroides fragilis isolates by matrix-assisted laser desorption ionization-time of flight mass spectrometry.J Clin Microbiol. 2011; 1: 1961-1964
- Carbapenemases: a problem in waiting?.Curr Opin Microbiol. 2000; 3: 489-495
- Genotypic identification of two groups within the species Bacteroides fragilis by ribotyping and by analysis of PCR-generated fragment patterns and insertion sequence content.J Bacteriol. 1995; 1: 5270-5275
- Novel method for detection of β-lactamases by using a chromogenic cephalosporin substrate.Antimicrob Agents Chemother. 1972; 1: 283-288
- Matrix-assisted laser desorption ionization-time of flight mass spectrometry-based functional assay for rapid detection of resistance against B-lactam antibiotics.J Clin Microbiol. 2012; 1: 927-937
- Using matrix-assisted laser desorption ionization-time of flight mass spectrometry to detect carbapenem resistance within 1 to 2.5 hours.J Clin Microbiol. 2011; 1: 3321-3324
- Carbapenemase activity detection by matrix-assisted laser desorption ionization-time of flight mass spectrometry.J Clin Microbiol. 2011; 1: 3222-3227
- Outer membrane permeability and antibiotic resistance.Biochim Biophys Acta. 2009; 1794: 808-816
- Use of several inducer and substrate antibiotic combinations in a disk approximation assay format to screen for AmpC induction in patient isolates of Pseudomonas aeruginosa, Enterobacter spp., Citrobacter spp., and Serratia spp.J Clin Microbiol. 2005; 1: 5945-5949
Article info
Footnotes
The authors have nothing to disclose.